I've had a quick look at the code, it does indeed look for the setname no matter what merge mode is set...so for incomplete clone X of parent Y in a merged set it only tries to copy/(re)move the archive/folder with the clone name. Guess I will update that for merge mode to do the action on the parent, too...
"Incomplete" matches missing, wrong hash, wrong length ...but not wrong name.
So as long as you select an incomplete parentset entry it should work for you.
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